Merative US L.P.

Mechanisms are provided to implement a patient summary generation engine with deduplication of instances of medical concepts. The patient summary generation engine parses a patient electronic medical record (EMR) to extract a plurality of instances of a medical concept, at least two of which utilize different representations of the medical concept. The patient summary generation engine performs a similarity analysis between each of the instances of a medical concept to thereby calculate, for a plurality of combinations of instances of the medical concept, a similarity metric value. The patient summary generation engine clusters the instances of the medical concept based on the calculated similarity metric values for each combination of instances in the plurality of combinations of instances of the medical concept to thereby generate one or more clusters, and select a representative instance of the medical concept from each cluster in the one or more clusters. The patient summary generation engine generates a summary output of the patient EMR comprising the selected representative instances of the medical concept from each cluster.

Mechanisms are provided to hypothetical scenario evaluations with regard to infectious disease dynamics based on similar regions. A user definition of a hypothetical scenario for a target region is received which specifies scenario features affecting an infectious disease spread amongst a population within the target region. Other predefined regions, in the set of predefined regions, having similar region characteristics to the target region are identified and attributes of the other predefined regions corresponding to the scenario features are identified. Modified model parameter(s) for an infectious disease computer model are derived based on the identified attributes. An instance of the infectious disease computer model is configured with the modified model parameter(s) and the instance is executed on case report data for the target region to generate a prediction for an infectious disease spread in the target region according to the hypothetical scenario, which is then output.

A medical episode analysis engine is provided. The engine generates a first matrix data structure having an entry for each concept pairing and storing a value representing relatedness weighted according to a temporal weighting function. The engine generates a second matrix data structure by calculating, for each entry in the first matrix, a relatedness measure of the concepts in the concept pairing based on a frequency of occurrence together. The engine generates, for each first concept, a concept embedding, based on the second matrix, that specifies, for each other second concept, a temporally weighted relatedness measure. The engine generates, for each anchor concepts, a corresponding episode definition comprising a plurality of related concepts corresponding to a same episode, based on the concept embedding. The engine processes new input data based on the episode definition data structures to identify instances of corresponding episodes in the new input data.

Mechanisms are provided for implementing a disambiguation engine for disambiguating content. Electronic content is received from a corpus of electronic content, and analyzed to identify an ambiguous portion of content. The ambiguous portion of content is a portion of the electronic content whose meaning is not made explicit in the ambiguous portion of content. A context associated with the ambiguous portion of content is determined and a set of one or more context based ambiguous content interpretation rules associated with the determined context is applied to the ambiguous portion of content to generate an interpretation of the ambiguous portion of content. The ambiguous portion of content is annotated based on the interpretation to generate disambiguated electronic content which is stored for processing as part of a subsequent operation.

Methods and systems for processing medical images. One method includes, in response to startup of an application using an algorithm, creating a server process supporting a programming language associated with the algorithm and loading a plurality of deep learning models used by the algorithm into a memory of the server process to create in-memory models. The method also includes processing a first set of one or more medical images with the server process using the algorithm and at least one model selected from the in-memory models, maintaining the in-memory models in the memory of the server process after processing the first set of one or more medical images, and, in response to a request to process a second set of one or more medical images, processing the second set of one or more medical images using the algorithm and at least one of the in-memory models.

A computer system identifies a medical condition in a patient. A trained machine learning image generator is used to generate a set of training images based on three-dimensional patient imaging data, wherein each training image is labeled with a projection angle of the corresponding two-dimensional projection. Using the set of training images, a machine learning image classifier model is trained to identify patient rotation angles in x-ray images. X-ray images are processed with the machine learning image classifier model to identify patient rotation angles. A machine learning medical condition classifier model is trained to identify a medical condition using the labeled x-ray images. The machine learning medical condition classifier model determines an indication of the medical condition in a patient's x-ray image. Embodiments of the present invention further include a method and program product for identifying a medical condition in a patient in substantially the same manner described above.

Methods and systems for clinical report generation. One system includes an electronic processor configured to receive a query image and determine a similarity metric for a plurality of medical images, where the similarity metric represents a similarity between the query image and each of the plurality of medical images. The electronic processor is also configured to determine a predetermined number of medical images from the plurality of medical images based on the similarity metric for each of the plurality of medical images. The electronic processor is also configured to rank a plurality of reports, where each of the plurality of reports correspond to one of the predetermined number of medical images. The electronic processor is also configured to generate a clinical report including information extracted from at least one of the plurality of reports based on the ranking of the plurality of reports.

A mechanism is provided in a data processing system comprising a processor and a memory, the memory comprising instructions that are executed by the processor to specifically configure the processor to implement a repetitive portion identification and weighting engine. A machine learning model is trained for weighting repetitive portions of patient electronic medical records (EMRs). A repetitive portion identification component applies a plurality of templates to clinical notes of a patient EMR to identify one or more candidate portions that match at least one of the plurality of templates. A content analysis component performs content analysis on the one or more candidate portions to determine whether each given candidate portion is relevant. A weighting component assigns a relative weight to each given candidate portion based on relevance. A cognitive summary graphical user interface (GUI) generation component generates cognitive summary reflecting at least a subset of the one or more candidate portions of the patient EMR. The mechanism outputs the cognitive summary in a GUI to a user.

A system, method, and computer program product for treatment planning are disclosed. The system includes at least one processing component, at least one memory component, a training module, a retrieval module, and a plan generator. The training module generates hash codes by hashing features from data sources with data source-specific hash functions, and generates superclass hash codes by hashing the generated hash codes with at least one superclass hash function. The retrieval module extracts features from case data, and locates features from the data sources that are similar to the extracted features. The plan generator calculates outcome probabilities for the case data based on known outcomes associated with the located features.

A mechanism is provided in a data processing system comprising least one processor and at least one memory, the at least one memory comprising instructions executed by the at least one processor to cause the at least one processor to implement a clinical decision support system. The mechanism receives a plurality of patient electronic medical records (EMRs) for a patient from a plurality of different sources. For a portion of a patient EMR record of the plurality of patient EMRs, the mechanism detects entities and analyzes a document structure of the portion of the patient EMR to identify a hierarchical structure of the portion of the patient EMR. The mechanism generates a container representation of the portion of the patient EMR based on the hierarchical structure. The mechanism placing each of the one or more sentences within the container representation based on relative position within the hierarchical structure. The mechanism generates a knowledge graph using the detected entities and the container representation.